DNA Array Fees

Fees

Full service analysis includes Agilent RNA quality evaluation, sample labeling, hybridization, staining, scanning and data output.  In addition, the Core will accept labeled RNA samples for hybridization to and scanning of Affymetrix arrays.  The Core will not provide any reagents to investigators labeling their own samples.

ServiceOn CampusOff Campus
3' Expression Array Processing$250/sample$400/sample
HTA or MTA Processing$250/sample$400/sample
Clariom D Processing$250/sample$400/sample
Clariom S Processing$250/sample$400/sample
miRNA Array Processing$150/sample$250
Sample Hybridization, Staining and Scanning Only$100/sampleNot currently available
Data Storage Fee$40/experiment$80/experiment
Data Analysis by Core$50/hour*$100/hour*
Use of Ingenuity Pathway Analysis$125/monthN/A
*$50/hour charge beyond data extraction and QC

Note:  The investigator is responsible for purchasing all expression arrays.

Processing fees include:

  • RNA validation - one assay
  • cDNA synthesis
  • Labeling
  • Target spikes for assay control and sensitivity
  • Data output

 Affymetrix Array Prices as of August 2017:

Array TypeCost Per ArrayMinimum Array PurchaseArray Data Sheet
Human U133 Plus 2.0$400 2Data Sheet
HTA 2.0$2502Data Sheet
Clariom D Human$2502Data Sheet
Clariom S Human$14010Data Sheet
Mouse 430 2.0$4002Data Sheet
MTA 1.0$2502Data Sheet
Clariom D Mouse$2502Data Sheet
Clariom S Mouse$14010Data Sheet
RTA 1.0$2502Data Sheet
Rat 230 2.0$4002Data Sheet
Clariom D Rat$2502Data Sheet
Clariom S Rat$14010Data Sheet
miRNA v 4.0$2252Data Sheet
For a complete list of Affymetrix arrays, part numbers and costs, please visit ThermoFisher Scientific or contact our current Sales Representative,  Dallas Henson.  He can be reached by email at dallas.henson@thermofisher.com.  To compare array types, please reference the data sheets above.

Clariom S vs Clariom D:  Clariom S arrays provide a snapshot view of the transcriptome, while Clariom D arrays provide a deeper view.  Clariom D arrays will allow you to interrogate > 500,000 transcripts, including splice variants, rare RNA isoforms and long-noncoding RNA.  Clariom S arrays will allow you to interrogate only well-annotated genes.